Using dplyr::count() with variable column names
Using dplyr::count() with variable column names
Posts
2024
2023
NF workshop UiO
Notes from the NF workshop at UiO in December 2023
Nextflow selectors
Notes on selectors in Nextflow
Split column with variable number of elements
Use str_split() to split a column when the number of elements is variable
Use stringr to extract only digits or only characters
Use R regex and the stringr package to match only digits or only characters
Leverage NF-core tooling and standards
Notes from the webinar by Seqera Labs on using NF-core tools
Advanced Training - September 2023
Notes from the advanced training in September 2023
Using map() to read files
Some snippets on using map() to read files
Move every other row into two columns
Use pivot_wider() to move every other row into two columns
Arrange rows in custom order
Arrange rows in custom order
Notes on HCV RAS
Notes on HCV resistance mutations and drugs
Howe et al. 2022 JHEP Reports
Title: Characteristics of hepatitis C virus resistance in an international cohort after a decade of direct-acting antivirals
Some notes on using Nextflow
Some notes on Hybrid deployment, Nextflow Tower and Operators
2020
Plot coverage from bamfiles
Use R and Tidyverse to plot read coverage from a bamfile
2019
Our paper on cellularization in Sphaeroforma arctica is out in eLife!
Check out our latest publication on development and cellularization in the ichthyosporean Sphaeroforma arctica which has been published in eLife.
Our pre-print on cellularization in S. arctica is featured in preLights
Our preprint on the development and cellularization of the ichthyosporean S. arctica is featured in preLights
Story on Forskning.no about our micro RNA research
Forskning.no recently made a small piece about our research on micro RNAs in the single-celled animal relatives.
2018
Our paper on microRNAs in animal relatives is out in Current Biology!
Finally our study on microRNAs and their biogenesis machinery in ichthyosporeans is published in Current Biology.
2017
Our MBE paper on single-cell transcriptomics of Rhizaria is out!
Finally our paper using single-cell transcriptomics on Radiolarians is published in MBE.
Hverken fugl eller fisk, eller sopp, bare et nesledyr…
Genetiske analyser viser at Dendrogramma bare er et nesledyr…
2016
Svampene tar tilbake førsteplassen
Svampene har tatt tilbake plassen som det første dyret
2015
Ribbemaneter med skjelett
Selv om dagens ribbemaneter bare er noen myke geleklumper, viser nye fossiler at de kanskje en gang hadde skjelett.
2014
Hverken fugl eller fisk, eller sopp
Dendrogramma, en ny dyrerekke er funnet
Var forfaren vår en ribbemanet?
Ribbemanetene har tatt over plassen som det første dyret
2013
Gener som oppstår fra søppel?!
Noen gener har oppstått fra søppel-DNA
RNA gir nytt liv til teorien om arv av ervervede egenskaper
Små RNA-molekyler kan nedarves fra mor til barn
1900
Combine mutate() with string manipulation
Create a new column with mutate() by manipulating strings in another column