Our paper on cellularization in Sphaeroforma arctica is out in eLife!
Check out our latest publication on development and cellularization in the ichthyosporean Sphaeroforma arctica which has been published in eLife.
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blog
Our pre-print on cellularization in S. arctica is featured in preLights
Our preprint on the development and cellularization of the ichthyosporean S. arctica is featured in preLights
Story on Forskning.no about our micro RNA research
Forskning.no recently made a small piece about our research on micro RNAs in the single-celled animal relatives.
Our paper on microRNAs in animal relatives is out in Current Biology!
Finally our study on microRNAs and their biogenesis machinery in ichthyosporeans is published in Current Biology.
Our MBE paper on single-cell transcriptomics of Rhizaria is out!
Finally our paper using single-cell transcriptomics on Radiolarians is published in MBE.
Hverken fugl eller fisk, eller sopp, bare et nesledyr…
Genetiske analyser viser at Dendrogramma bare er et nesledyr…
Svampene tar tilbake førsteplassen
Svampene har tatt tilbake plassen som det første dyret
Ribbemaneter med skjelett
Selv om dagens ribbemaneter bare er noen myke geleklumper, viser nye fossiler at de kanskje en gang hadde skjelett.
Hverken fugl eller fisk, eller sopp
Dendrogramma, en ny dyrerekke er funnet
Var forfaren vår en ribbemanet?
Ribbemanetene har tatt over plassen som det første dyret
Gener som oppstår fra søppel?!
Noen gener har oppstått fra søppel-DNA
RNA gir nytt liv til teorien om arv av ervervede egenskaper
Små RNA-molekyler kan nedarves fra mor til barn
paper_notes
Howe et al. 2022 JHEP Reports
Title: Characteristics of hepatitis C virus resistance in an international cohort after a decade of direct-acting antivirals
Datasets
Ondracka et al. 2023. F1000Research
Datasets from Ondracka et al. 2023. F1000Research
Bråte et al. 2019. F1000Research
Datasets from Bråte et al. 2019. F1000Research
Gulbrandsen et al. 2021. Journal of Phycology
Data from Gulbrandsen et al. 2021. Journal of Phycology
Bråte et al. 2018. Current Biology
Datasets from Bråte et al. 2018. Current Biology
Dudin et al. 2019. eLife
Data from Dudin et al. 2019. eLife
R
Plotting coverage from bamfiles
Plotting the mapping of reads from bamfiles with samtools depth and R
abel
Working on the Abel compute cluster at UiO
How to set up a bioinformatics project on Abel at UiO
Setting up a project on Abel
How to set up a bioinformatics project on Abel at UiO
Checking sequence quality using FastQC
How to run FastQC on your sequence data
Quality trimming and removing adaptors
How to set up a bioinformatics project on Abel at UiO
Mapping reads to reference genome
How to map reads to a reference genome using TopHat2 project on Abel at UiO
Testing Gist and embedding scripts
How to use a Gist to embed code